Connect Sign In
The Institute for Clinical and Experimental Research® is focused on the development of new diagnostic assays in a wide range of disciplines. Researchers at the institute regularly publish in respected, peer-reviewed journals, give presentations at national and international organizations, author books and book chapters, and develop new tests.
Publications by Year
Recent Publications
Attaway C, Mathison BA, Misra A. No longer stuck in the past: new advances in artificial intelligence and molecular assays for parasitology screening and diagnosis. Current Opinion In Infectious Disease October 2024; 37: 357-366.
Jama MA, Reading NS, Fredrickson E, Shaaban S, Ji Y. A single multiplex PCR and Single Nucleotide Extension Assay for the detection of common Thanatophoric dysplasia I and II mutations. The Journal of Molecular Diagnostics September 2024; ISSN 1525-1578.
Cyrta J, Dermawan JK, Tauziède-Espariat A, Liu T, Rosenblum M, Shroff S, Katabi N, Cardoen L, Guillemot D, Masliah-Planchon J, Hoare O, Delattre O, Bale T, Bourdeaut F, Antonescu CR. Expanding the clinicopathologic spectrum and genomic landscape of tumors with SMARCA2/4::CREM fusions. J Pathol September 2024.
Masuda S, Lemaitre F, Barten MJ, Bergan S, Shipkova M, van Gelder T, Vinks S, Wieland E, Bornemann-Kolatzki K, Brunet M, de Winter B, Dieterlen MT, Elens L, Ito T, Johnson-Davis K, Kunicki PK, Lawson R, Lloberas N, Marquet P, Millan O, Mizuno T, Moes DJAR, Noceti O, Oellerich M, Pattanaik S, Pawinski T, Seger C, van Schaik R, Venkataramanan R, Walson P, Woillard JB, Langman LJ. Everolimus personalized therapy: second consensus report by the International Association of Therapeutic Drug Monitoring and Clinical Toxicology. Ther Drug Monit September 2024.
Ravkov EV, Ventura MF, Gudipaty S, Ng D, Delgado JC, Lin L. Converting an HLA-B27 flow assay from the BD FACSCanto to the BD FACSLyric. Cytometry Part B: Clinical Cytometry September 2024.
Ingoglia F, Tanfous M, Ellezam B, Anderson KJ, Pasquali M, Botto LD. MADD-like pattern of acylcarnitines associated with sertraline use. Mol Genet Metab Rep September 2024; 41:101142.
Shean RC, Garrett E, Malleis J, Lieberman JA, Bradley BT. A retrospective observational study of mNGS test utilization to examine the role of diagnostic stewardship at two academic medical centers. J Clin Microbiol September 2024; 62(9):e0060524.
Spies NC, Farnsworth CW, Wheeler S, McCudden CR. Validating, Implementing, and Monitoring Machine Learning Solutions in the Clinical Laboratory Safely and Effectively. Clin Chem September 2024.
Sandoval Karamian AG, Baker M, Palmquist R, Wilkes J, Porter C, Olsen J, Dempsey L, Tidwell TJ, Sweney M, Bonkowsky JL. Pediatric epilepsy genetic testing results and long-term seizure freedom. J Child Neurol September 2024.
Vernet Machado Bressan Wilke M, Goldstein J, Groopman E, Mohan S, Waddell A, Fernandez R, Chen H, Bali D, Baudet H, Clarke L, Hung C, Mao R, Yuzyuk T, Craigen WJ, Pinto E Vairo F. Developing a scoring system for gene curation prioritization in lysosomal diseases. Mol Genet Metab September 2024; 143(1-2):108572.
van Wijk XMR, Master SR, Genzen JR. FDA's final rule on Laboratory Developed Tests. Clin Chem September 2024; 70(9):1192-1194.
Mathison BA, Pritt BS. Arthropod Ectoparasites. International Encyclopedia of Public Health, 3rd ed. September 2024; Vol. 3, pp. 633-650.
Pinsky BA, Bradley BT. Opportunities and challenges for the U.S. laboratory response to highly pathogenic avian influenza A(H5N1). J Clin Virol August 2024; 174:105723.
Gill GS, Lu HB, Bui H, Clark RM, Ramirez RA. Short-term responses of spider mites inform mechanisms of maize resistance to a generalist herbivore. Sci Rep August 2024; 14(1):19607.
Jennings I, Meijer P, Arunachalam S, Marlar RA, Olson JD, Zantek ND, Bon C, Dean E, Hollestelle MJ, Meley R, Plumhoff EA, Reilly-Stitt C, Salazar E, Smock KJ, Spannagl M, Walker ID. Comparison of Thrombophilia Assay Results for the International Society on Thrombosis and Haemostasis Scientific and Standardization Committee Plasma Standard from Different External Quality Assessment Providers-for the External Quality Assurance in Thrombosis and Haemostasis Group. Semin Thromb Hemost August 2024.
Vardell VA, Ose J, Rets AV, Tantravahi SK, Patel AB. Chronic Myelomonocytic Leukemia and Atypical Chronic Myeloid Leukemia: a national analysis. Clin Lymphoma Myeloma Leuk July 2024; S2152-2650(24)00283-0.
Chambliss AB, Souers RJ, Genzen JR, Manthei DM. Reported awareness and use of Pyridoxal-5'-Phosphate supplementation in Alanine Aminotransferase and Aspartate Aminotransferase assay reagents: a survey by the College of American Pathologists Clinical Chemistry Committee. Arch Pathol Lab Med July 2024.
Albertson D, Barry M, Liu T, Mahlow J, Sirohi D. Genotype phenotype correlation of renal tumors in the Cancer Genome Atlas Database. Int J Surg Pathol July 2024.
Smock KJ, Moffat KA. Laboratory diagnostics for thrombosis and hemostasis testing-Part 3. Semin Thromb Hemost July 2024.
Pratt VM, Cavallari LH, Fulmer ML, Gaedigk A, Hachad H, Ji Y, Kalman LV, Ly RC, Moyer AM, Scott SA, Turner AJ, van Schaik RHN, Whirl-Carrillo M, Weck KE. DPYD genotyping recommendations: a joint consensus recommendation of the Association for Molecular Pathology, American College of Medical Genetics and Genomics, Clinical Pharmacogenetics Implementation Consortium, College of American Pathologists, Dutch Pharmacogenetics Working Group of the Royal Dutch Pharmacists Association, European Society for Pharmacogenomics and Personalized Therapy, Pharmacogenomics Knowledgebase, and Pharmacogene Variation Consortium. J Mol Diagn July 2024; 26(10):851-863.
Guess T, Wheeler FC, Yenamandra A, Schilit SLP, Anderson HS, Bone KM, Carstens B, Conlin L, Dulik MC, Dupont BR, Fanning E, Gardner JA, Haag M, Hilton BA, Johnson J, Kogan J, Murry J, Polonis K, Quigley DI, Repnikova EA, Rowsey RA, Spinner N, Stoeker M, Thurston V, Wiley M, Zhang L. A multicenter analysis of individuals with a 47,XXY/46,XX karyotype. Genet Med July 2024; 26(10):101212.
Whitehead KJ, Toydemir D, Wooderchak-Donahue W, Oakley GM, McRae B, Putnam A, McDonald J, Bayrak-Toydemir P. Investigation of the genetic determinants of Telangiectasia and Solid Organ Arteriovenous Malformation Formation in Hereditary Hemorrhagic Telangiectasia (HHT). Int J Mol Sci July 2024; 25(14):7682.
Zerella JR, Homan CC, Arts P, Lin X, Spinelli SJ, Venugopal P, Babic M, Brautigan P, Truong L, Arriola-Martinez LA, Moore S, Hollins R, Parker W, Nguyen H, Kassahn KS, Branford S, Feurstein SK, Larcher L, Sicre de Fontbrune F, Demirdas S, de Munnik S, Poirel HA, Brichard B, Mansour S, Gordon K, Network EVR, Wlodarski MW, Koppayi AL, Dobbins S, Mutsaers PGNJ, Nichols KE, Oak N, DeMille D, Mao R, Crawford A, McCarrier J, Basel D, Flores-Daboub J, Drazer MW, Phillips K, Poplawski N, Birdsey GM, Pirri D, Ostergaard P, Simons A, Godley LA, Ross DM, Hiwase DK, Soulier J, Brown AL, Carmichael CL, Scott HS, Hahn CN. Germline ERG haploinsufficiency defines a new syndrome with cytopenia and hematological malignancy predisposition. Blood July 2024.
Metcalf RA, Lin H, Wilburn J, Lex A. An innovative data visualization tool for patient blood management. Transfusion July 2024; 64(8):1590-1591.
Baryeh K, Zhou R, Brown E, McMillin GA, Krasowski MD, Johnson-Davis KL. Retrospective data analysis reveals unusual metabolism pattern of ethanol in pediatrics as compared to adult and geriatric populations. J Appl Lab Med July 2024; 9(4):767-775.
Snozek CLH, Yee CI, Bryksin J, Dahal R, Gerson B, Gherasim C, Hauff KD, Heger N, Huestis MA, Johnson-Davis KL, Knezevic CE, Love SA, Melanson SEF, Noguez JH, Pikulski M, Roper S, Tyagi M, Warrington JS, Yang HS, Yang YK. Assessing knowledge gaps and educational needs in urine drug test interpretation among health care professionals. Am J Clin Pathol July 2024.
Merrill AE, Hackenmueller SA, Derdeyn C, Genzen J, Gruson D, Ludgate M, Mulchandani S, Parnas ML, Ranheim E. Beyond the screen: navigating remote work within medicine. Clin Chem June 2024.
Zhang X, Ding Y, Li P, Bourgeois K, Rangan A, Herrick JL, Pardanani A, Chen D, Viswanatha D, He R, Zheng G. Null-type SH2B3 mutations are potential drivers in a subset of Ph-negative myeloproliferative neoplasms. Am J Hematol June 2024.
Baryeh K, Zhou R, Brown E, McMillin GA, Krasowski MD, Johnson-Davis KL. Retrospective data analysis reveals unusual metabolism pattern of ethanol in pediatrics as compared to adult and geriatric populations. J Appl Lab Med May 2024.
Schmitt JS, Knight LD. Method validation study of dipstick urinalysis as a screening tool for Sodium Nitrite toxicity. Am J Forensic Med Pathol May 2024.
Smith L, Carricaburu LA, Genzen JR. The US FDA's proposed rule on laboratory-developed tests: Impacts on clinical laboratory testing. Pract Lab Med May 2024; 40:e00407.
Davis PM, Ravkov E, de Geus M, Clauss Z, Lee J, Nguyen AT, Hartmann M, Kim J, George TI, Lin L, Ng DP. Synthetic abnormal mast cell particles successfully mimic neoplastic mast cells by flow cytometry. Cytometry B May 2024.
Bassani S, Chrast J, Ambrosini G, Voisin N, Schütz F, Brusco A, Sirchia F, Turban L, Schubert S, Abou Jamra R, Schlump JU, DeMille D, Bayrak-Toydemir P, Nelson GR, Wong KN, Duncan L, Mosera M, Gilissen C, Vissers LELM, Pfundt R, Kersseboom R, Yttervik H, Hansen GÅM, Smeland MF, Butler KM, Lyons MJ, Carvalho CMB, Zhang C, Lupski JR, Potocki L, Flores-Gallegos L, Morales-Toquero R, Petit F, Yalcin B, Tuttle A, Elloumi HZ, McCormick L, Kukolich M, Klaas O, Horvath J, Scala M, Iacomino M, Operto F, Zara F, Writzl K, Maver A, Haanpää MK, Pohjola P, Arikka H, Kievit AJA, Calandrini C, Iseli C, Guex N, Reymond A. Variant-specific pathophysiological mechanisms of AFF3 differently influence transcriptome profiles. Genome Medicine May 2024; 16(1):72.
Jebaraj BMC, Liew M, Seyfried F. Editorial: Reviews in hematologic malignancies: 2023. Frontiers in Oncology May 2024; 14:1412843.
DeMille D, McDonald J, Bernabeu C, Racher H, Olivieri C, Cantarini C, Sbalchiero A, Thompson BA, Jovine L, Shovlin CL, Dupuis-Girod S, Lesca G, Tusseau M, Ganguly A, Kasthuri RS, Jessen J, Massink MPG, Ichikawa S, Bayrak-Toydemir P. Specifications of the ACMG/AMP variant curation guidelines for Hereditary Hemorrhagic Telangiectasia Genes—ENG and ACVRL1. Human Mutation May 2024.
Martins TB, Hill HR, Peterson LK. Specimen type validation and establishment of normal cytokine reference intervals in cerebrospinal fluid. Journal of Immunological Methods May 2024; 529:113681.
Wilcock DM, Goold E, Zuromski LM, Davidson C, Mao Q, Sirohi D. EGFR/CEP7 high polysomy is separate and distinct from EGFR amplification in glioblastoma as determined by fluorescence in situ hybridization. J Neuropathol Exp Neurol April 2024; 83(5):338-344.
Rets AV, George TI. How I diagnose systemic mastocytosis. Am J Clin Pathol April 2024.
Pritt BS, Mathison BA. The role of the clinical parasitology laboratory in delusional infestations. Physicians Guide to Delusional Infestation April 2024.
Underhill HR, Karsy M, Davidson CJ, Hellwig S, Stevenson S, Goold EA, Vincenti S, Sellers DL, Dean C, Harrison BE, Bronner MP, Colman H, Jensen RL. Subclonal cancer driver mutations are prevalent in the unresected peritumoral edema of adult Diffuse Gliomas. Cancer Research April 2024; 84 (7): 1149–1164.
Luong K, Lozier BK, Novis CL, Smith TL, Zuromski LM, and Peterson LK. Comparison of three methods for the detection of antibodies against muscle-specific kinase. Journal of Immunological Methods March 2024; 526:113627.
